23-1-2019 ReproducibiliTea #19: How to code like a pro – Workshop Henk van der Veen

Preparation: follow these steps, (approx. 15 min):  https://hampei.github.io/rstuff/install_quick.html & bring your laptop!

Thursday, January 23rd, 10.00 – 11.00.
Location: UMCG, Triadebuilding entrance 24, room k1.25

More and more, researchers are required to share code and enable others to reproduce their results. However, most of us have received little (if any) training on how to code properly, effectively and efficiently, deal with version control, or encounter reproducibility issues due to updating R-packages. On top of that, it can be really scary to share your code, warts and all, even if you think you’ve done a good job. Luckily there are various tools and software to help.

In this workshop, Henk van der Veen, senior software engineer at Roqua, will give an overview how to create and share code in a way that let’s other people (including future you) easily contribute to or reproduce your results. The focus will be on the packrat package in R and github repositories, as two steps in the coding chain. Henk will discuss advantages of a code repository, and explain about branches, pull requests, coding style and code reviews. Bring your laptop to play around with these technologies, and if there is enough time we might do a coding exercise.
IMPORTANT: To make sure we don’t spend 20 minutes on installing everything in the beginning, if you plan to bring your laptop and try the software, please follow these steps before the session (approx. 15 min): https://hampei.github.io/rstuff/install_quick.html. If you run into trouble/have any questions contact me (Daan) or Henk.


Daan Orneé